Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn5aQ9JJV9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Mir770-201ENSMUST00000103252 94 ntBASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Gm37722-201ENSMUST00000193757 208 ntBASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn5aQ9JJV9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Actl10-202ENSMUST00000226583 1501 ntBASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn5aQ9JJV9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn5aQ9JJV9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn5aQ9JJV9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn5aQ9JJV9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms