Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h8Q9JJ48 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h8Q9JJ48 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Zc3h8Q9JJ48 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Zc3h8Q9JJ48 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.33■□□□□ 0.2
Zc3h8Q9JJ48 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h8Q9JJ48 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h8Q9JJ48 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h8Q9JJ48 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h8Q9JJ48 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Idnk-204ENSMUST00000226010 1898 ntBASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Gm5417-201ENSMUST00000079706 384 ntBASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h8Q9JJ48 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zc3h8Q9JJ48 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zc3h8Q9JJ48 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zc3h8Q9JJ48 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zc3h8Q9JJ48 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zc3h8Q9JJ48 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.28■□□□□ 0.2
Zc3h8Q9JJ48 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms