Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Nup50Q9JIH2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup50Q9JIH2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Dio3-201ENSMUST00000097228 1449 ntBASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup50Q9JIH2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Mir6349-201ENSMUST00000184059 97 ntBASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup50Q9JIH2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Gm11643-201ENSMUST00000119578 864 ntBASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup50Q9JIH2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Gm4968-201ENSMUST00000071458 858 ntBASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup50Q9JIH2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms