Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn3Q9ES97 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Gm2399-201ENSMUST00000104944 225 ntBASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn3Q9ES97 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rtn3Q9ES97 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Gm18666-201ENSMUST00000190039 958 ntBASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn3Q9ES97 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn3Q9ES97 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn3Q9ES97 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Gm5643-201ENSMUST00000117081 966 ntBASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn3Q9ES97 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Flg-201ENSMUST00000050758 1488 ntBASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms