Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3bQ9ES34 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3bQ9ES34 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3bQ9ES34 Grk6-206ENSMUST00000224995 2971 ntBASIC20.92■□□□□ 0.94
Ube3bQ9ES34 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3bQ9ES34 Gm13836-201ENSMUST00000121159 501 ntBASIC20.92■□□□□ 0.94
Ube3bQ9ES34 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.92■□□□□ 0.94
Ube3bQ9ES34 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.92■□□□□ 0.94
Ube3bQ9ES34 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3bQ9ES34 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Gm37025-201ENSMUST00000195159 829 ntBASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3bQ9ES34 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.89■□□□□ 0.94
Ube3bQ9ES34 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ube3bQ9ES34 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ube3bQ9ES34 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ube3bQ9ES34 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Gm7889-201ENSMUST00000185591 958 ntBASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3bQ9ES34 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Gm7791-201ENSMUST00000219066 539 ntBASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3bQ9ES34 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.87■□□□□ 0.93
Ube3bQ9ES34 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms