Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Gm8520-201ENSMUST00000186517 868 ntBASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a3bpQ9EQG9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col4a3bpQ9EQG9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col4a3bpQ9EQG9 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Gm13168-201ENSMUST00000121771 632 ntBASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Gm22240-201ENSMUST00000175225 82 ntBASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a3bpQ9EQG9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Dio3-201ENSMUST00000097228 1449 ntBASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a3bpQ9EQG9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a3bpQ9EQG9 Flg-201ENSMUST00000050758 1488 ntBASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Gm29791-202ENSMUST00000207888 369 ntBASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a3bpQ9EQG9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a3bpQ9EQG9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Mir8112-201ENSMUST00000184382 131 ntBASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms