Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf6Q9DBU5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf6Q9DBU5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf6Q9DBU5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf6Q9DBU5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf6Q9DBU5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf6Q9DBU5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf6Q9DBU5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Gm20760-201ENSMUST00000179197 648 ntBASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf6Q9DBU5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf6Q9DBU5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Gm5643-201ENSMUST00000117081 966 ntBASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Gm6576-201ENSMUST00000169678 883 ntBASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.89■□□□□ 0.61
Rnf6Q9DBU5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Gm42545-201ENSMUST00000202755 922 ntBASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf6Q9DBU5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Gm10653-202ENSMUST00000139570 835 ntBASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf6Q9DBU5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf6Q9DBU5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms