Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Rarb-207ENSMUST00000225921 2756 ntBASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssmem1Q9D9Y8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssmem1Q9D9Y8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Gm13401-201ENSMUST00000117074 291 ntBASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Mir5122-201ENSMUST00000175004 89 ntBASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms