Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn22Q9D7U6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Gm22325-201ENSMUST00000158904 308 ntBASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cldn22Q9D7U6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn22Q9D7U6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn22Q9D7U6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn22Q9D7U6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn22Q9D7U6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Mir7071-201ENSMUST00000184847 69 ntBASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cldn22Q9D7U6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Gm15378-201ENSMUST00000121894 207 ntBASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn22Q9D7U6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Gm6576-201ENSMUST00000169678 883 ntBASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn22Q9D7U6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms