Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Dancr-204ENSMUST00000132389 2347 ntBASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx47Q9CWX9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx47Q9CWX9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx47Q9CWX9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx47Q9CWX9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx47Q9CWX9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ddx47Q9CWX9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx47Q9CWX9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx47Q9CWX9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.08■□□□□ 0.49
Ddx47Q9CWX9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx47Q9CWX9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms