Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.69■□□□□ 0.9
Smc3Q9CW03 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.68■□□□□ 0.9
Smc3Q9CW03 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smc3Q9CW03 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.68■□□□□ 0.9
Smc3Q9CW03 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.67■□□□□ 0.9
Smc3Q9CW03 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Gm44549-201ENSMUST00000208351 577 ntBASIC20.66■□□□□ 0.9
Smc3Q9CW03 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc3Q9CW03 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Zfp783-201ENSMUST00000095946 670 ntBASIC20.65■□□□□ 0.9
Smc3Q9CW03 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc3Q9CW03 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc3Q9CW03 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc3Q9CW03 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc3Q9CW03 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc3Q9CW03 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc3Q9CW03 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smc3Q9CW03 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms