Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc40Q9CRC8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc40Q9CRC8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc40Q9CRC8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc40Q9CRC8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc40Q9CRC8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc40Q9CRC8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrrc40Q9CRC8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Gm11643-201ENSMUST00000119578 864 ntBASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrrc40Q9CRC8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrrc40Q9CRC8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lrrc40Q9CRC8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lrrc40Q9CRC8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.46■□□□□ 0.38
Lrrc40Q9CRC8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.45■□□□□ 0.38
Lrrc40Q9CRC8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lrrc40Q9CRC8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrc40Q9CRC8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrc40Q9CRC8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrc40Q9CRC8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Lrrc40Q9CRC8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms