Protein–RNA interactions for Protein: Q9CQX0

Otub2, Ubiquitin thioesterase OTUB2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub2Q9CQX0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otub2Q9CQX0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Otub2Q9CQX0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otub2Q9CQX0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otub2Q9CQX0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otub2Q9CQX0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otub2Q9CQX0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Otub2Q9CQX0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.03■□□□□ 0.32
Otub2Q9CQX0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otub2Q9CQX0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otub2Q9CQX0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otub2Q9CQX0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Otub2Q9CQX0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Otub2Q9CQX0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Otub2Q9CQX0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Otub2Q9CQX0 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.02■□□□□ 0.31
Otub2Q9CQX0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Otub2Q9CQX0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Otub2Q9CQX0 Gm10013-201ENSMUST00000106074 672 ntBASIC17■□□□□ 0.31
Otub2Q9CQX0 Gm6659-201ENSMUST00000174752 547 ntBASIC17■□□□□ 0.31
Otub2Q9CQX0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17■□□□□ 0.31
Otub2Q9CQX0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17■□□□□ 0.31
Otub2Q9CQX0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17■□□□□ 0.31
Otub2Q9CQX0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Otub2Q9CQX0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Otub2Q9CQX0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Otub2Q9CQX0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Gm16061-201ENSMUST00000122167 857 ntBASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Gm37025-201ENSMUST00000195159 829 ntBASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Gm18032-201ENSMUST00000222541 538 ntBASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Otub2Q9CQX0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms