Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTRAFQ9CQE8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.35□□□□□ -0.11
RTRAFQ9CQE8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RTRAFQ9CQE8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RTRAFQ9CQE8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RTRAFQ9CQE8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RTRAFQ9CQE8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.33□□□□□ -0.12
RTRAFQ9CQE8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms