Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Gm14523-201ENSMUST00000117260 558 ntBASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chchd1Q9CQA6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chchd1Q9CQA6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Chchd1Q9CQA6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chchd1Q9CQA6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chchd1Q9CQA6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chchd1Q9CQA6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms