Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim11Q99PQ2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Mtag2-201ENSMUST00000058665 714 ntBASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim11Q99PQ2 Dio3-201ENSMUST00000097228 1449 ntBASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim11Q99PQ2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim11Q99PQ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim11Q99PQ2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.02■□□□□ 0.79
Trim11Q99PQ2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.01■□□□□ 0.79
Trim11Q99PQ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim11Q99PQ2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20■□□□□ 0.79
Trim11Q99PQ2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20■□□□□ 0.79
Trim11Q99PQ2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim11Q99PQ2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20■□□□□ 0.79
Trim11Q99PQ2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Mir6349-201ENSMUST00000184059 97 ntBASIC20■□□□□ 0.79
Trim11Q99PQ2 Mir8112-201ENSMUST00000184382 131 ntBASIC20■□□□□ 0.79
Trim11Q99PQ2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20■□□□□ 0.79
Trim11Q99PQ2 Gm10138-203ENSMUST00000206952 366 ntBASIC20■□□□□ 0.79
Trim11Q99PQ2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim11Q99PQ2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim11Q99PQ2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Trim11Q99PQ2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20■□□□□ 0.79
Trim11Q99PQ2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim11Q99PQ2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms