Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh15Q99PJ1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh15Q99PJ1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdh15Q99PJ1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh15Q99PJ1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdh15Q99PJ1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdh15Q99PJ1 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.02■□□□□ 0.8
Pcdh15Q99PJ1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh15Q99PJ1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh15Q99PJ1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh15Q99PJ1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdh15Q99PJ1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh15Q99PJ1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh15Q99PJ1 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.02■□□□□ 0.79
Pcdh15Q99PJ1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh15Q99PJ1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh15Q99PJ1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.01■□□□□ 0.79
Pcdh15Q99PJ1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 AC161829.1-201ENSMUST00000220298 281 ntBASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Vti1a-206ENSMUST00000225529 1244 ntBASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdh15Q99PJ1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh15Q99PJ1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Gm15372-201ENSMUST00000120729 834 ntBASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdh15Q99PJ1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Rps4l-201ENSMUST00000071745 943 ntBASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh15Q99PJ1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh15Q99PJ1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.96■□□□□ 0.79
Pcdh15Q99PJ1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh15Q99PJ1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh15Q99PJ1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms