Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Il3ra-202ENSMUST00000223589 738 ntBASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh23Q99PF4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Gm26039-201ENSMUST00000158152 144 ntBASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Gm43575-201ENSMUST00000196420 516 ntBASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh23Q99PF4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Auts2-212ENSMUST00000178555 309 ntBASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Gm18195-201ENSMUST00000207604 706 ntBASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh23Q99PF4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdh23Q99PF4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Cdh23Q99PF4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.96■□□□□ 0.46
Cdh23Q99PF4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.96■□□□□ 0.46
Cdh23Q99PF4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh23Q99PF4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh23Q99PF4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms