Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hdac9Q99N13 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac9Q99N13 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.68■□□□□ 0.9
Hdac9Q99N13 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Gm11355-201ENSMUST00000121120 306 ntBASIC20.68■□□□□ 0.9
Hdac9Q99N13 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.68■□□□□ 0.9
Hdac9Q99N13 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac9Q99N13 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Gm17971-201ENSMUST00000190239 806 ntBASIC20.67■□□□□ 0.9
Hdac9Q99N13 Gm17808-201ENSMUST00000200859 894 ntBASIC20.67■□□□□ 0.9
Hdac9Q99N13 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.67■□□□□ 0.9
Hdac9Q99N13 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac9Q99N13 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Gm17807-201ENSMUST00000186869 298 ntBASIC20.66■□□□□ 0.9
Hdac9Q99N13 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac9Q99N13 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hdac9Q99N13 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac9Q99N13 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.65■□□□□ 0.9
Hdac9Q99N13 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.65■□□□□ 0.9
Hdac9Q99N13 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Hdac9Q99N13 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac9Q99N13 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac9Q99N13 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.64■□□□□ 0.9
Hdac9Q99N13 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac9Q99N13 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.64■□□□□ 0.89
Hdac9Q99N13 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac9Q99N13 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac9Q99N13 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms