Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.68■□□□□ 0.9
Hps4Q99KG7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Gm16061-201ENSMUST00000122167 857 ntBASIC20.68■□□□□ 0.9
Hps4Q99KG7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps4Q99KG7 Gm18101-201ENSMUST00000215769 548 ntBASIC20.67■□□□□ 0.9
Hps4Q99KG7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps4Q99KG7 Gm7367-201ENSMUST00000057611 492 ntBASIC20.67■□□□□ 0.9
Hps4Q99KG7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps4Q99KG7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hps4Q99KG7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps4Q99KG7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps4Q99KG7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps4Q99KG7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 AA414768-201ENSMUST00000121924 1257 ntBASIC20.66■□□□□ 0.9
Hps4Q99KG7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps4Q99KG7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps4Q99KG7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Hps4Q99KG7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Hps4Q99KG7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hps4Q99KG7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hps4Q99KG7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Gm6345-202ENSMUST00000180900 204 ntBASIC20.64■□□□□ 0.89
Hps4Q99KG7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Gm10819-201ENSMUST00000099988 561 ntBASIC20.64■□□□□ 0.89
Hps4Q99KG7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Hps4Q99KG7 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.64■□□□□ 0.89
Hps4Q99KG7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Hps4Q99KG7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Idnk-204ENSMUST00000226010 1898 ntBASIC20.63■□□□□ 0.89
Hps4Q99KG7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Gm37025-201ENSMUST00000195159 829 ntBASIC20.63■□□□□ 0.89
Hps4Q99KG7 Gm7370-201ENSMUST00000219471 767 ntBASIC20.63■□□□□ 0.89
Hps4Q99KG7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.63■□□□□ 0.89
Hps4Q99KG7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps4Q99KG7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Gm9731-201ENSMUST00000209480 747 ntBASIC20.62■□□□□ 0.89
Hps4Q99KG7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps4Q99KG7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Gm13474-201ENSMUST00000122466 815 ntBASIC20.61■□□□□ 0.89
Hps4Q99KG7 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.61■□□□□ 0.89
Hps4Q99KG7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms