Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.72■□□□□ 0.43
Cdk9Q99J95 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk9Q99J95 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdk9Q99J95 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdk9Q99J95 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk9Q99J95 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk9Q99J95 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdk9Q99J95 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cdk9Q99J95 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk9Q99J95 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.67■□□□□ 0.42
Cdk9Q99J95 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Gm5874-201ENSMUST00000096101 508 ntBASIC17.67■□□□□ 0.42
Cdk9Q99J95 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.67■□□□□ 0.42
Cdk9Q99J95 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms