Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rfc4Q99J62 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc4Q99J62 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.27■□□□□ 0.84
Rfc4Q99J62 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc4Q99J62 Gm5587-201ENSMUST00000206270 674 ntBASIC20.27■□□□□ 0.84
Rfc4Q99J62 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Rfc4Q99J62 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc4Q99J62 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.27■□□□□ 0.84
Rfc4Q99J62 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rfc4Q99J62 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rfc4Q99J62 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rfc4Q99J62 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Gm7370-201ENSMUST00000219471 767 ntBASIC20.25■□□□□ 0.83
Rfc4Q99J62 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.25■□□□□ 0.83
Rfc4Q99J62 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfc4Q99J62 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Gm9013-201ENSMUST00000132939 882 ntBASIC20.24■□□□□ 0.83
Rfc4Q99J62 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.24■□□□□ 0.83
Rfc4Q99J62 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfc4Q99J62 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.24■□□□□ 0.83
Rfc4Q99J62 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Rfc4Q99J62 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Mir1668-201ENSMUST00000184114 107 ntBASIC20.23■□□□□ 0.83
Rfc4Q99J62 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfc4Q99J62 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Gm13401-201ENSMUST00000117074 291 ntBASIC20.22■□□□□ 0.83
Rfc4Q99J62 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Gm17971-201ENSMUST00000190239 806 ntBASIC20.22■□□□□ 0.83
Rfc4Q99J62 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.22■□□□□ 0.83
Rfc4Q99J62 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfc4Q99J62 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.21■□□□□ 0.83
Rfc4Q99J62 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms