Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim11aQ99J19 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim11aQ99J19 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.24■□□□□ 0.35
Smim11aQ99J19 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Gm42642-201ENSMUST00000200683 355 ntBASIC17.24■□□□□ 0.35
Smim11aQ99J19 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.24■□□□□ 0.35
Smim11aQ99J19 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.24■□□□□ 0.35
Smim11aQ99J19 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim11aQ99J19 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smim11aQ99J19 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Smim11aQ99J19 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.22■□□□□ 0.35
Smim11aQ99J19 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim11aQ99J19 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim11aQ99J19 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smim11aQ99J19 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim11aQ99J19 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.2■□□□□ 0.34
Smim11aQ99J19 Gm38285-201ENSMUST00000192928 922 ntBASIC17.2■□□□□ 0.34
Smim11aQ99J19 AV356131-201ENSMUST00000206201 750 ntBASIC17.2■□□□□ 0.34
Smim11aQ99J19 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms