Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Gm11539-201ENSMUST00000119837 557 ntBASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Gm13436-201ENSMUST00000120418 567 ntBASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Gm13559-201ENSMUST00000120476 863 ntBASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Gm13836-201ENSMUST00000121159 501 ntBASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prdm9Q96EQ9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Gm9987-201ENSMUST00000069768 567 ntBASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prdm9Q96EQ9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm9Q96EQ9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm9Q96EQ9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Prdm9Q96EQ9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms