Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Gm5417-201ENSMUST00000079706 384 ntBASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha11Q91Y19 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Gm4974-201ENSMUST00000209974 875 ntBASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha11Q91Y19 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Idnk-204ENSMUST00000226010 1898 ntBASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha11Q91Y19 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha11Q91Y19 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdha11Q91Y19 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Gm21814-202ENSMUST00000203277 873 ntBASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Odf3b-204ENSMUST00000227834 930 ntBASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms