Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Gm37856-201ENSMUST00000191634 999 ntBASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb1Q91Y08 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Gm18666-201ENSMUST00000190039 958 ntBASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Trmt13-210ENSMUST00000198454 880 ntBASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb1Q91Y08 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhb1Q91Y08 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Gm18025-201ENSMUST00000221733 862 ntBASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb1Q91Y08 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Gm6576-201ENSMUST00000169678 883 ntBASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb1Q91Y08 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms