Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Gm715-201ENSMUST00000117865 831 ntBASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb2Q91Y00 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb2Q91Y00 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb2Q91Y00 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb2Q91Y00 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb2Q91Y00 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb2Q91Y00 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms