Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb4Q91XZ6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb4Q91XZ6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Gm37179-201ENSMUST00000194862 823 ntBASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Gm44549-201ENSMUST00000208351 577 ntBASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb4Q91XZ6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Gm2399-201ENSMUST00000104944 225 ntBASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb4Q91XZ6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms