Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb4Q91XX6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Dio3-201ENSMUST00000097228 1449 ntBASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Gm8969-201ENSMUST00000199694 526 ntBASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Gm29791-202ENSMUST00000207888 369 ntBASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb4Q91XX6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb4Q91XX6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb4Q91XX6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdhgb4Q91XX6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb4Q91XX6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb4Q91XX6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb4Q91XX6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb4Q91XX6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb4Q91XX6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhgb4Q91XX6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Gm11249-201ENSMUST00000117071 859 ntBASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb4Q91XX6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms