Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Gm13158-201ENSMUST00000122007 736 ntBASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Gm29791-202ENSMUST00000207888 369 ntBASIC18.17■□□□□ 0.5
Ddx1Q91VR5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx1Q91VR5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Gm7367-201ENSMUST00000057611 492 ntBASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Gm10819-201ENSMUST00000099988 561 ntBASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx1Q91VR5 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx1Q91VR5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx1Q91VR5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx1Q91VR5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx1Q91VR5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx1Q91VR5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Mir5122-201ENSMUST00000175004 89 ntBASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx1Q91VR5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Mir8112-201ENSMUST00000184382 131 ntBASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Gm10138-203ENSMUST00000206952 366 ntBASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.13■□□□□ 0.49
Ddx1Q91VR5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx1Q91VR5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Mir6349-201ENSMUST00000184059 97 ntBASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Gm27741-201ENSMUST00000185060 237 ntBASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms