Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.15■□□□□ 0.02
Tram1Q91V04 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tram1Q91V04 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tram1Q91V04 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.14■□□□□ 0.01
Tram1Q91V04 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tram1Q91V04 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tram1Q91V04 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tram1Q91V04 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tram1Q91V04 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.13■□□□□ 0.01
Tram1Q91V04 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 Gm9847-201ENSMUST00000052528 599 ntBASIC15.13■□□□□ 0.01
Tram1Q91V04 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tram1Q91V04 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.13■□□□□ 0.01
Tram1Q91V04 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tram1Q91V04 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.13■□□□□ 0.01
Tram1Q91V04 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Tram1Q91V04 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.12■□□□□ 0.01
Tram1Q91V04 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.12■□□□□ 0.01
Tram1Q91V04 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tram1Q91V04 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Tram1Q91V04 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms