Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40cQ8VHQ4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rab40cQ8VHQ4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Gm26833-201ENSMUST00000180899 440 ntBASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40cQ8VHQ4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Haglr-201ENSMUST00000100000 2085 ntBASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab40cQ8VHQ4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Gm40848-201ENSMUST00000221998 324 ntBASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab40cQ8VHQ4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Gm43017-201ENSMUST00000198296 752 ntBASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms