Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.07■□□□□ 0.48
Ssx2ipQ8VC66 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx2ipQ8VC66 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx2ipQ8VC66 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx2ipQ8VC66 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx2ipQ8VC66 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Gm2399-201ENSMUST00000104944 225 ntBASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.05■□□□□ 0.48
Ssx2ipQ8VC66 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssx2ipQ8VC66 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.03■□□□□ 0.48
Ssx2ipQ8VC66 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Flg-201ENSMUST00000050758 1488 ntBASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssx2ipQ8VC66 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssx2ipQ8VC66 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssx2ipQ8VC66 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssx2ipQ8VC66 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssx2ipQ8VC66 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssx2ipQ8VC66 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ssx2ipQ8VC66 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms