Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpap2Q8VC34 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpap2Q8VC34 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpap2Q8VC34 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpap2Q8VC34 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpap2Q8VC34 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpap2Q8VC34 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpap2Q8VC34 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpap2Q8VC34 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpap2Q8VC34 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpap2Q8VC34 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rpap2Q8VC34 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Gm22240-201ENSMUST00000175225 82 ntBASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpap2Q8VC34 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Gm4974-201ENSMUST00000209974 875 ntBASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms