Protein–RNA interactions for Protein: Q8R3Y8

Irf2bp1, Interferon regulatory factor 2-binding protein 1, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf2bp1Q8R3Y8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Irf2bp1Q8R3Y8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm7638-201ENSMUST00000121348 967 ntBASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf2bp1Q8R3Y8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf2bp1Q8R3Y8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf2bp1Q8R3Y8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf2bp1Q8R3Y8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms