Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.79■□□□□ 0.44
Slf1Q8R3P9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slf1Q8R3P9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slf1Q8R3P9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slf1Q8R3P9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.77■□□□□ 0.43
Slf1Q8R3P9 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.77■□□□□ 0.43
Slf1Q8R3P9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slf1Q8R3P9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slf1Q8R3P9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slf1Q8R3P9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slf1Q8R3P9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slf1Q8R3P9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms