Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Gm13401-201ENSMUST00000117074 291 ntBASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r28Q8R2C9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vmn1r28Q8R2C9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Gm11643-201ENSMUST00000119578 864 ntBASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r28Q8R2C9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r28Q8R2C9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Idnk-204ENSMUST00000226010 1898 ntBASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r28Q8R2C9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms