Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd3Q8R1N4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd3Q8R1N4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.6■□□□□ 0.41
Nudcd3Q8R1N4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nudcd3Q8R1N4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.58■□□□□ 0.41
Nudcd3Q8R1N4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nudcd3Q8R1N4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nudcd3Q8R1N4 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nudcd3Q8R1N4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms