Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sf3a1Q8K4Z5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sf3a1Q8K4Z5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Gm12382-201ENSMUST00000122005 922 ntBASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Gm6576-201ENSMUST00000169678 883 ntBASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.51■■□□□ 1.03
Sf3a1Q8K4Z5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sf3a1Q8K4Z5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sf3a1Q8K4Z5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.48■■□□□ 1.03
Sf3a1Q8K4Z5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.47■■□□□ 1.03
Sf3a1Q8K4Z5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms