Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1lQ8K1X4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1lQ8K1X4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1lQ8K1X4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Rab3c-203ENSMUST00000224180 967 ntBASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1lQ8K1X4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nckap1lQ8K1X4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nckap1lQ8K1X4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nckap1lQ8K1X4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.08■□□□□ 0.33
Nckap1lQ8K1X4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nckap1lQ8K1X4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nckap1lQ8K1X4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Gm44549-201ENSMUST00000208351 577 ntBASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Gm10602-201ENSMUST00000098239 609 ntBASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nckap1lQ8K1X4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Gm5408-201ENSMUST00000197998 747 ntBASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nckap1lQ8K1X4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms