Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rl1Q8K0S5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rl1Q8K0S5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.82■□□□□ 0.44
Rtn4rl1Q8K0S5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rl1Q8K0S5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rl1Q8K0S5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Fst-202ENSMUST00000223640 2612 ntBASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm18669-201ENSMUST00000216049 778 ntBASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rl1Q8K0S5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4rl1Q8K0S5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm11950-201ENSMUST00000121615 838 ntBASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm18958-201ENSMUST00000174258 762 ntBASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rtn4rl1Q8K0S5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Actl10-202ENSMUST00000226583 1501 ntBASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.77■□□□□ 0.44
Rtn4rl1Q8K0S5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rl1Q8K0S5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rl1Q8K0S5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rl1Q8K0S5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.77■□□□□ 0.43
Rtn4rl1Q8K0S5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rl1Q8K0S5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rl1Q8K0S5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm7461-201ENSMUST00000058918 827 ntBASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rl1Q8K0S5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms