Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Gm37179-201ENSMUST00000194862 823 ntBASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgcs1Q8JZK9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Zfp783-201ENSMUST00000095946 670 ntBASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hmgcs1Q8JZK9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgcs1Q8JZK9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Rab3c-203ENSMUST00000224180 967 ntBASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgcs1Q8JZK9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgcs1Q8JZK9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgcs1Q8JZK9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.77■□□□□ 0.27
Hmgcs1Q8JZK9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.77■□□□□ 0.27
Hmgcs1Q8JZK9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.77■□□□□ 0.27
Hmgcs1Q8JZK9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgcs1Q8JZK9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgcs1Q8JZK9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms