Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps50Q8CI71 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps50Q8CI71 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps50Q8CI71 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.27■□□□□ 0.36
Vps50Q8CI71 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps50Q8CI71 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps50Q8CI71 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps50Q8CI71 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Vps50Q8CI71 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps50Q8CI71 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.26■□□□□ 0.35
Vps50Q8CI71 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.26■□□□□ 0.35
Vps50Q8CI71 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps50Q8CI71 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.26■□□□□ 0.35
Vps50Q8CI71 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps50Q8CI71 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.24■□□□□ 0.35
Vps50Q8CI71 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Gm12527-201ENSMUST00000117967 564 ntBASIC17.24■□□□□ 0.35
Vps50Q8CI71 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps50Q8CI71 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Trmt13-210ENSMUST00000198454 880 ntBASIC17.23■□□□□ 0.35
Vps50Q8CI71 Gm2559-201ENSMUST00000201323 363 ntBASIC17.23■□□□□ 0.35
Vps50Q8CI71 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.23■□□□□ 0.35
Vps50Q8CI71 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.23■□□□□ 0.35
Vps50Q8CI71 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.23■□□□□ 0.35
Vps50Q8CI71 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps50Q8CI71 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms