Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb7Q8CDY9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.66■□□□□ 0.42
Pcdhb7Q8CDY9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb7Q8CDY9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb7Q8CDY9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb7Q8CDY9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Flg-201ENSMUST00000050758 1488 ntBASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb7Q8CDY9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms