Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Gm27321-201ENSMUST00000185021 205 ntBASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pabpn1Q8CCS6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 AC154222.1-201ENSMUST00000223882 475 ntBASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Pabpn1Q8CCS6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Pabpn1Q8CCS6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Pabpn1Q8CCS6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Pabpn1Q8CCS6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
Pabpn1Q8CCS6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pabpn1Q8CCS6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Pabpn1Q8CCS6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pabpn1Q8CCS6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 AC153794.1-201ENSMUST00000169148 126 ntBASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pabpn1Q8CCS6 Gm9727-201ENSMUST00000161387 555 ntBASIC27.36■■□□□ 1.97
Pabpn1Q8CCS6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC27.36■■□□□ 1.97
Pabpn1Q8CCS6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC27.36■■□□□ 1.97
Pabpn1Q8CCS6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pabpn1Q8CCS6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Rprl3-201ENSMUST00000157400 290 ntBASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Gm25911-201ENSMUST00000157621 56 ntBASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Pabpn1Q8CCS6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Gm45683-201ENSMUST00000210825 1247 ntBASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Pabpn1Q8CCS6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC27.33■■□□□ 1.97
Pabpn1Q8CCS6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC27.33■■□□□ 1.97
Pabpn1Q8CCS6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pabpn1Q8CCS6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC27.33■■□□□ 1.97
Pabpn1Q8CCS6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pabpn1Q8CCS6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pabpn1Q8CCS6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pabpn1Q8CCS6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Gm14140-201ENSMUST00000119999 995 ntBASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Gm43935-201ENSMUST00000203569 1050 ntBASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 AC090659.1-201ENSMUST00000224334 768 ntBASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pabpn1Q8CCS6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Pabpn1Q8CCS6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC27.3■■□□□ 1.96
Pabpn1Q8CCS6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC27.3■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms