Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Shisa4Q8CA71 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Shisa4Q8CA71 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Shisa4Q8CA71 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Shisa4Q8CA71 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Shisa4Q8CA71 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa4Q8CA71 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.51■□□□□ 0.87
Shisa4Q8CA71 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.5■□□□□ 0.87
Shisa4Q8CA71 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Shisa4Q8CA71 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Shisa4Q8CA71 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Odf3b-204ENSMUST00000227834 930 ntBASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa4Q8CA71 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Shisa4Q8CA71 Gm38027-201ENSMUST00000192315 235 ntBASIC20.47■□□□□ 0.87
Shisa4Q8CA71 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.47■□□□□ 0.87
Shisa4Q8CA71 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa4Q8CA71 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa4Q8CA71 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa4Q8CA71 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa4Q8CA71 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Timm23-208ENSMUST00000226683 750 ntBASIC20.46■□□□□ 0.87
Shisa4Q8CA71 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Gm5417-201ENSMUST00000079706 384 ntBASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa4Q8CA71 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa4Q8CA71 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa4Q8CA71 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa4Q8CA71 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms