Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.58■□□□□ 0.88
Alx1Q8C8B0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Alx1Q8C8B0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Gm5417-201ENSMUST00000079706 384 ntBASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Alx1Q8C8B0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx1Q8C8B0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.55■□□□□ 0.88
Alx1Q8C8B0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx1Q8C8B0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Mir6982-201ENSMUST00000184354 68 ntBASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Rarb-207ENSMUST00000225921 2756 ntBASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.54■□□□□ 0.88
Alx1Q8C8B0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx1Q8C8B0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx1Q8C8B0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.52■□□□□ 0.88
Alx1Q8C8B0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.52■□□□□ 0.87
Alx1Q8C8B0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Alx1Q8C8B0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Alx1Q8C8B0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Alx1Q8C8B0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Gm7638-201ENSMUST00000121348 967 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms