Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc60Q8C4J0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.44■■□□□ 1.18
Ccdc60Q8C4J0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Fcho2-208ENSMUST00000224992 2964 ntBASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Ccdc60Q8C4J0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC22.42■■□□□ 1.18
Ccdc60Q8C4J0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Mir8112-201ENSMUST00000184382 131 ntBASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Gm10517-202ENSMUST00000192970 758 ntBASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Gm44832-201ENSMUST00000208849 2303 ntBASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc60Q8C4J0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ccdc60Q8C4J0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Ccdc60Q8C4J0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Ccdc60Q8C4J0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc60Q8C4J0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc60Q8C4J0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Gm37811-201ENSMUST00000192416 2601 ntBASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc60Q8C4J0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms