Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp44Q8C2S0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp44Q8C2S0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Gm24841-201ENSMUST00000158676 357 ntBASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Usp44Q8C2S0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Usp44Q8C2S0 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.58■□□□□ 0.88
Usp44Q8C2S0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp44Q8C2S0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp44Q8C2S0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp44Q8C2S0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp44Q8C2S0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Gm10812-201ENSMUST00000099864 546 ntBASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp44Q8C2S0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms