Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Sh3rf3Q8C120 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Gm10653-202ENSMUST00000139570 835 ntBASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3rf3Q8C120 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
Sh3rf3Q8C120 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3rf3Q8C120 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Gm15375-201ENSMUST00000119510 849 ntBASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Gm13158-201ENSMUST00000122007 736 ntBASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Gm10138-203ENSMUST00000206952 366 ntBASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Gm29791-202ENSMUST00000207888 369 ntBASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3rf3Q8C120 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3rf3Q8C120 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3rf3Q8C120 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3rf3Q8C120 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3rf3Q8C120 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3rf3Q8C120 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3rf3Q8C120 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Sh3rf3Q8C120 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Gm13401-201ENSMUST00000117074 291 ntBASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms